Cpa|evm.model.tig00021036.51

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS16 component

Gene families : OG0002911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002911_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021036.51

Target	Alias	Description	ECC score	Gene Family Method
AT5G56940	No alias	Ribosomal protein S16 family protein	0.01	OrthoFinder output from all 47 species
Adi_g010764	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Adi_g051942	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Adi_g074405	SSR16	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Len_g04546	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Sam_g10314	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Solyc07g008660.3.1	Solyc07g008660	component mtRPS16 of small ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000307	Ribosomal_S16	9	71

External Links

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Cpa|evm.model.tig00021036.51

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation