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  5. Cpa|evm.model.tig00021012.34

Cpa|evm.model.tig00021012.34


Description : DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana


Gene families : OG0005520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021012.34

Target Alias Description ECC score Gene Family Method Actions
Aop_g14661 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cre07.g334200 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g11073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431728g0010 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp4g18960.1 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sam_g09581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 297 464
IPR001650 Helicase_C 500 607
No external refs found!