Cpa|evm.model.tig00020961.57


Description : Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007302_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020961.57
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Adi_g053093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24909.t1 Aspi01Gene24909 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.01G001200.1 Ceric.01G001200 not classified & original description: pacid=50590454... 0.01 OrthoFinder output from all 47 species
Cre16.g687300 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g27653 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g05414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g05080.1 LOC_Os01g05080 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_503287g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Mp7g06080.1 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Nbi_g06581 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g14110 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g59221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022678 No alias not classified & original description: CDS=682-1350 0.02 OrthoFinder output from all 47 species
Smo76876 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 116 152
No external refs found!