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  5. Cpa|evm.model.tig00020912.28

Cpa|evm.model.tig00020912.28 (CCB3, atylmg3, YLMG3)


Aliases : CCB3, atylmg3, YLMG3

Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB3 component


Gene families : OG0006561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020912.28

Target Alias Description ECC score Gene Family Method Actions
AT5G36120 CCB3, atylmg3, YLMG3 cofactor assembly, complex C (B6F) 0.02 OrthoFinder output from all 47 species
Aob_g12753 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Dcu_g02417 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Dde_g40122 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
GSVIVT01010180001 CCB3, atylmg3, YLMG3 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
LOC_Os01g73540.1 CCB3, atylmg3,... assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Pir_g12781 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019313 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Sam_g19475 No alias assembly factor CCB3 of CCB cytochrome b6 maturation... 0.01 OrthoFinder output from all 47 species
Sam_g19476 No alias assembly factor CCB3 of CCB cytochrome b6 maturation... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 71 139
No external refs found!