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  5. Cpa|evm.model.tig00020904.115

Cpa|evm.model.tig00020904.115


No description available


Gene families : OG0001271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020904.115
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Ala_g21747 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g44810.1 LOC_Os03g44810 Probable E3 ubiquitin-protein ligase BAH1-like 1... 0.01 OrthoFinder output from all 47 species
MA_12120g0010 No alias Probable E3 ubiquitin-protein ligase BAH1-like 1... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 426 516
IPR027370 Znf-RING_euk 38 78
No external refs found!