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  5. Cpa|evm.model.tig00020903.30

Cpa|evm.model.tig00020903.30


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit


Gene families : OG0005353 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020903.30
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00026500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
AT5G20890 No alias TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Adi_g092819 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Aob_g06619 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.01 OrthoFinder output from all 47 species
Aop_g02199 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0251.g060285 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Cba_g33878 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.01 OrthoFinder output from all 47 species
Ceric.02G085300.1 Ceric.02G085300 subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.01 OrthoFinder output from all 47 species
Cre09.g416750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.1 OrthoFinder output from all 47 species
Dac_g00849 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g14728 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g02581 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01008708001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
LOC_Os03g42220.1 LOC_Os03g42220 CCT2 subunit beta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Len_g15421 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
MA_10434959g0010 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Mp5g16030.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Nbi_g03110 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Ore_g15486 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.01 OrthoFinder output from all 47 species
Pp3c6_15940V3.1 Pp3c6_15940 TCP-1/cpn60 chaperonin family protein 0.01 OrthoFinder output from all 47 species
Sam_g12467 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.01 OrthoFinder output from all 47 species
Solyc11g069000.2.1 Solyc11g069000 CCT2 subunit beta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Spa_g11138 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Tin_g02689 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e017228_P001 Zm00001e017228 CCT2 subunit beta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Zm00001e025595_P002 Zm00001e025595 CCT2 subunit beta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 45 525
No external refs found!