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  5. Cpa|evm.model.tig00020903.27

Cpa|evm.model.tig00020903.27


Description : Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana


Gene families : OG0002899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020903.27
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Aop_g01783 SRPK4 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Azfi_s0143.g051463 SRPK4 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
GSVIVT01022292001 No alias Protein modification.phosphorylation.CMGC kinase... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53720.1 SRPK4, LOC_Os03g53720 protein kinase (SRPK) 0.02 OrthoFinder output from all 47 species
Ore_g17296 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Pir_g09587 SRPK4 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Spa_g29901 SRPK4 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Zm00001e005671_P002 Zm00001e005671 protein kinase (SRPK) 0.01 OrthoFinder output from all 47 species
Zm00001e010308_P001 Zm00001e010308 protein kinase (SRPK) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 81 242
No external refs found!