Cpa|evm.model.tig00020780.14

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS21 component

Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020780.14

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00200410	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Als_g29961	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Aop_g23096	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Aspi01Gene35458.t1	Aspi01Gene35458	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Aspi01Gene35458.t2	Aspi01Gene35458	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Azfi_s0022.g016110	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Azfi_s2932.g113764	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Cba_g37485	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Cre03.g203450	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.01	OrthoFinder output from all 47 species
Dcu_g13598	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Dde_g15855	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01017756001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species
Gb_35516	No alias	component RPS21 of SSU proteome	0.02	OrthoFinder output from all 47 species
Ore_g24223	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Pp3c24_8160V3.1	Pp3c24_8160	Ribosomal protein S21e	0.03	OrthoFinder output from all 47 species
Pp3c26_3000V3.1	Pp3c26_3000	Ribosomal protein S21e	0.03	OrthoFinder output from all 47 species
Sam_g07802	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Sam_g07803	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Solyc04g074910.3.1	Solyc04g074910	component RPS21 of SSU proteome	0.04	OrthoFinder output from all 47 species
Zm00001e001637_P002	Zm00001e001637	component RPS21 of SSU proteome	0.11	OrthoFinder output from all 47 species
Zm00001e011684_P002	Zm00001e011684	component RPS21 of SSU proteome	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001931	Ribosomal_S21e	8	86

External Links

No external refs found!

Cpa|evm.model.tig00020780.14

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation