- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG0001500 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001500_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00020723.96 | |
| Cluster | HCCA: Cluster_53 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020616.25 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021534.7 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Cre01.g021700 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre02.g117000 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Cre07.g320750 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g518350 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g520100 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre13.g574400 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cre13.g603350 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | HCCA |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0009235 | cobalamin metabolic process | IEP | HCCA |
| BP | GO:0009236 | cobalamin biosynthetic process | IEP | HCCA |
| BP | GO:0009314 | response to radiation | IEP | HCCA |
| BP | GO:0009416 | response to light stimulus | IEP | HCCA |
| BP | GO:0009581 | detection of external stimulus | IEP | HCCA |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | HCCA |
| BP | GO:0009583 | detection of light stimulus | IEP | HCCA |
| BP | GO:0009584 | detection of visible light | IEP | HCCA |
| BP | GO:0009605 | response to external stimulus | IEP | HCCA |
| BP | GO:0009628 | response to abiotic stimulus | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| MF | GO:0016852 | sirohydrochlorin cobaltochelatase activity | IEP | HCCA |
| BP | GO:0018298 | obsolete protein-chromophore linkage | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051606 | detection of stimulus | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |