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  5. Mp2g00410.1

Mp2g00410.1


Description : pre-mRNA-processing protein (PRP40A/B)


Gene families : OG_01_0002768 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002768_tree ,
OG_02_0003591 (LandPlants) Phylogenetic Tree(s): OG_02_0003591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g00410.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00227470 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.04 Archaeplastida
AT1G44910 ATPRP40A, PRP40A pre-mRNA-processing protein 40A 0.05 Archaeplastida
AT3G19670 ATPRP40B, PRP40B pre-mRNA-processing protein 40B 0.06 Archaeplastida
Cre07.g351000 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 Archaeplastida
GSVIVT01009302001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.09 Archaeplastida
LOC_Os01g34780.1 No alias pre-mRNA-processing protein (PRP40A/B) 0.04 Archaeplastida
MA_10433850g0010 No alias pre-mRNA-processing protein (PRP40A/B) 0.08 Archaeplastida
MA_8888g0010 No alias pre-mRNA-processing protein (PRP40A/B) 0.05 Archaeplastida
Pp3c19_9950V3.1 No alias pre-mRNA-processing protein 40A 0.02 Archaeplastida
Smo402621 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.07 Archaeplastida
Solyc07g022760.4.1 No alias pre-mRNA-processing protein (PRP40A/B) 0.09 Archaeplastida
Zm00001e020775_P002 No alias pre-mRNA-processing protein (PRP40A/B) 0.04 Archaeplastida
Zm00001e020778_P001 No alias pre-mRNA-processing protein (PRP40A/B) 0.06 Archaeplastida
AMTR_s00010p00227470 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.03 LandPlants
AT1G44910 ATPRP40A, PRP40A pre-mRNA-processing protein 40A 0.05 LandPlants
AT3G19670 ATPRP40B, PRP40B pre-mRNA-processing protein 40B 0.05 LandPlants
GSVIVT01009302001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.08 LandPlants
LOC_Os01g34780.1 No alias pre-mRNA-processing protein (PRP40A/B) 0.04 LandPlants
MA_8888g0010 No alias pre-mRNA-processing protein (PRP40A/B) 0.04 LandPlants
Pp3c19_9950V3.1 No alias pre-mRNA-processing protein 40A 0.02 LandPlants
Smo402621 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.07 LandPlants
Solyc07g022760.4.1 No alias pre-mRNA-processing protein (PRP40A/B) 0.07 LandPlants
Zm00001e020775_P002 No alias pre-mRNA-processing protein (PRP40A/B) 0.03 LandPlants
Zm00001e020778_P001 No alias pre-mRNA-processing protein (PRP40A/B) 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002713 FF_domain 662 710
IPR002713 FF_domain 735 791
IPR002713 FF_domain 593 643
IPR002713 FF_domain 871 918
IPR002713 FF_domain 526 575
IPR001202 WW_dom 295 323
IPR001202 WW_dom 339 364
No external refs found!