1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00020684.6

Cpa|evm.model.tig00020684.6 (SDIR1)


Aliases : SDIR1

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020684.6

Target Alias Description ECC score Gene Family Method Actions
Aev_g15196 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g02285 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g03039 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g03725 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g13903 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g26313 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene49237.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Azfi_s0163.g054250 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Cba_g70777 BRH1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.29G079200.1 Ceric.29G079200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000204.87 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Dac_g00960 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dac_g16301 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dac_g18891 ATL2, TL2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g06871 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
LOC_Os06g08820.1 LOC_Os06g08820 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os06g34470.1 RHA1B, LOC_Os06g34470 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os06g34560.1 ATL43, LOC_Os06g34560 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g18865 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g04431 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g04652 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Lfl_g11806 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pnu_g06737 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ppi_g24030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001460 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g15426 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sam_g20098 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Smo448587 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo74753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g01499 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Spa_g07427 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Spa_g11355 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 627 668
IPR000008 C2_dom 958 1070
No external refs found!