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  5. Cpa|evm.model.tig00020684.49

Cpa|evm.model.tig00020684.49


No description available


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020684.49
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT1G20693 NFD2, HMG BETA... high mobility group B2 0.01 OrthoFinder output from all 47 species
Ehy_g20583 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.01 OrthoFinder output from all 47 species
Tin_g40984 ATHMG, HMG, SSRP1, NFD not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 499 567
No external refs found!