Cpa|evm.model.tig00020684.46


No description available


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020684.46
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Aob_g39755 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g26720 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os02g52220.1 LOC_Os02g52220 Pentatricopeptide repeat-containing protein At1g73400,... 0.01 OrthoFinder output from all 47 species
MA_86400g0010 No alias Pentatricopeptide repeat-containing protein At5g18390,... 0.01 OrthoFinder output from all 47 species
Pp3c3_2440V3.1 Pp3c3_2440 Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g14416 PPR40 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc04g076370.4.1 Solyc04g076370 Pentatricopeptide repeat-containing protein At2g27800,... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 645 688
IPR002885 Pentatricopeptide_repeat 706 736
IPR002885 Pentatricopeptide_repeat 608 634
No external refs found!