Cpa|evm.model.tig00000123.14


Description : 29.2.1.2.1.16 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16 Ribosomal protein S5 domain 2-like superfamily protein


Gene families : OG_01_0001811 (Gene family) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00000123.14
Cluster HCCA cluster: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT2G09990 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.22 Gene family
Cre13.g573351 No alias 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.26 Gene family
GSVIVT01017923001 No alias 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.27 Gene family
LOC_Os11g03400 Os11g0127900 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.1 Gene family
LOC_Os12g03090 Os12g0124200 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.1 Gene family
MA_2656g0010 No alias 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.05 Gene family
Smo138369 PACid_15422105 No description available 0.13 Gene family
Solyc01g068530.3.1 Solyc01g068530.3 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.26 Gene family
Solyc04g026100.1.1 Solyc04g026100.1 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.31 Gene family
Solyc05g005690.1.1 Solyc05g005690.1 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.27 Gene family
Zm00001d005023 GRMZM2G377797 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.11 Gene family
Zm00001d023293 GRMZM2G427014 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.02 Gene family
Zm00001d044664 GRMZM2G353103 29.2.1.2.1.16 protein.synthesis.ribosomal... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 9 125
No external refs found!