1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00020614.45

Cpa|evm.model.tig00020614.45


Description : Pyruvate decarboxylase 2 OS=Oryza sativa subsp. japonica


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020614.45
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT5G01320 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.02 OrthoFinder output from all 47 species
Ala_g01989 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11584 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g01853 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g12579 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g05927 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g06499 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g05751 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g39310.1 LOC_Os05g39310 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os05g39320.1 LOC_Os05g39320 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species
Lfl_g10475 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Mp3g21090.1 No alias pyruvate decarboxylase 0.01 OrthoFinder output from all 47 species
Pir_g08830 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011301 No alias EC_4.1 carbon-carbon lyase & original description: CDS=224-1318 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0031419 cobalamin binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 241 337
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 48 220
IPR011766 TPP_enzyme_TPP-bd 443 507
No external refs found!