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  5. Cpa|evm.model.tig00020614.112

Cpa|evm.model.tig00020614.112 (CYCT1;4)


Aliases : CYCT1;4

Description : Cell cycle.regulation.cyclins.CYCT-type cyclin


Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020614.112

Target Alias Description ECC score Gene Family Method Actions
Adi_g115305 CYCT1;4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g45861 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.01 OrthoFinder output from all 47 species
Als_g57178 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g02220 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Aop_g18629 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Aspi01Gene16249.t1 Aspi01Gene16249 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene39823.t1 Aspi01Gene39823 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene67943.t2 CYCT1;4, Aspi01Gene67943 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g20668 CYCT1;4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23669 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.01 OrthoFinder output from all 47 species
Cba_g28766 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.01 OrthoFinder output from all 47 species
Cre10.g453050 No alias Cyclin-T1-4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
GSVIVT01013628001 CYCT1;4 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.03 OrthoFinder output from all 47 species
LOC_Os12g30020.2 CYCT1;4, LOC_Os12g30020 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species
Len_g09786 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Len_g19070 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.01 OrthoFinder output from all 47 species
Lfl_g05545 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.04 OrthoFinder output from all 47 species
Msp_g27107 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Nbi_g12236 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.01 OrthoFinder output from all 47 species
Ore_g10656 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.01 OrthoFinder output from all 47 species
Pir_g17325 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Pnu_g32549 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Smo140469 CYCT1;4 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Solyc07g032480.3.1 CYCT1;4, Solyc07g032480 cyclin (CYCT) 0.02 OrthoFinder output from all 47 species
Solyc09g075760.4.1 CYCT1;4, Solyc09g075760 cyclin (CYCT) 0.02 OrthoFinder output from all 47 species
Zm00001e013579_P002 CYCT1;4, Zm00001e013579 cyclin (CYCT) 0.01 OrthoFinder output from all 47 species
Zm00001e033879_P003 CYCT1;4, Zm00001e033879 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 17 123
IPR004367 Cyclin_C-dom 132 219
No external refs found!