LOC_Os02g08070 (Os02g0177300)


Aliases : Os02g0177300

Description : 33.3 development.squamosa promoter binding like (SPL) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation. squamosa promoter binding protein-like 8 (SPL8)


Gene families : OG_01_0000107 (Gene family) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g08070
Cluster HCCA cluster: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.02 Gene family
GSVIVT01010496001 No alias No description available 0.02 Gene family
MA_10429891g0010 No alias No description available 0.02 Gene family
MA_10429891g0020 No alias No description available 0.03 Gene family
MA_15381g0010 No alias 33.3 development.squamosa promoter binding like (SPL) In... 0.02 Gene family
MA_3179g0020 No alias 33.3 development.squamosa promoter binding like (SPL)... 0.02 Gene family
Solyc10g018780.2.1 Solyc10g018780.2 33.3 development.squamosa promoter binding like (SPL)... 0.03 Gene family
Solyc10g078700.2.1 Solyc10g078700.2 33.3 development.squamosa promoter binding like (SPL)... 0.03 Gene family
Zm00001d002005 GRMZM2G036297 33.3 development.squamosa promoter binding like (SPL)... 0.03 Gene family
Zm00001d006091 GRMZM2G061734 No description available 0.06 Gene family
Zm00001d006451 GRMZM2G113779 33.3 development.squamosa promoter binding like (SPL)... 0.03 Gene family
Zm00001d021056 GRMZM5G806833 No description available 0.03 Gene family
Zm00001d026175 GRMZM2G148467 33.3 development.squamosa promoter binding like (SPL)... 0.02 Gene family
Zm00001d031451 GRMZM2G160917 33.3 development.squamosa promoter binding like (SPL)... 0.02 Gene family
Zm00001d036692 GRMZM2G101499 33.3 development.squamosa promoter binding like (SPL)... 0.03 Gene family
Zm00001d046906 No alias 33.3 development.squamosa promoter binding like (SPL)... 0.03 Gene family
Zm00001d053890 GRMZM2G065451 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004333 SBP_dom 197 270
No external refs found!