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  5. Cpa|evm.model.tig00020603.85

Cpa|evm.model.tig00020603.85


Description : RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase


Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020603.85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00113p00140210 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
AT5G14580 No alias polyribonucleotide nucleotidyltransferase, putative 0.05 OrthoFinder output from all 47 species
Adi_g010370 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Ceric.25G023900.1 Ceric.25G023900 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
GSVIVT01032436001 No alias RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
Gb_15670 RIF10, PNP polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species
Gb_20425 No alias polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species
Mp7g12350.1 No alias polynucleotide phosphorylase (PNP) 0.04 OrthoFinder output from all 47 species
Sam_g09102 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Smo84724 No alias RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
Solyc02g086600.3.1 Solyc02g086600 polynucleotide phosphorylase (PNP) 0.03 OrthoFinder output from all 47 species
Zm00001e015113_P001 Zm00001e015113 polynucleotide phosphorylase (PNP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 328 423
IPR001247 ExoRNase_PH_dom1 57 186
No external refs found!