Mp1g28890.1


Description : alpha-class expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0000028 (LandPlants) Phylogenetic Tree(s): OG_02_0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g28890.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01030192001 No alias Expansin-A2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Gb_20678 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06060.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.01 Archaeplastida
MA_10434805g0030 No alias alpha-class expansin 0.04 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_651027g0010 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g12280.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.03 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo78615 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo95369 No alias Expansin-A10 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc06g049050.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e010388_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.02 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 LandPlants
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 LandPlants
Gb_20678 No alias alpha-class expansin 0.02 LandPlants
Smo78615 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 143 229
IPR007117 Expansin_CBD 241 319
No external refs found!