LOC_Os02g06910 (Os02g0164900)


Aliases : Os02g0164900

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167. auxin response factor 6 (ARF6)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g06910
Cluster HCCA cluster: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT5G20730 TIR5, MSG1,... Transcriptional factor B3 family protein /... 0.04 Gene family
Cpa|evm.model.tig00020904.93 No alias No description available 0.01 Gene family
GSVIVT01032251001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os11g32110 Os11g0523800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os12g29520 Os12g0479400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_40335g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Smo117217 PACid_15403898 No description available 0.02 Gene family
Solyc01g103050.3.1 Solyc01g103050.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d001879 GRMZM2G078274 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d014377 GRMZM2G035405 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d026590 GRMZM2G475882 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d032683 GRMZM2G153233 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d036593 GRMZM2G089640 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 134 235
IPR010525 Auxin_resp 260 343
IPR033389 AUX/IAA_dom 771 862
No external refs found!