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  5. Cpa|evm.model.tig00020554.58

Cpa|evm.model.tig00020554.58


Description : VAMP-like protein YKT61 OS=Arabidopsis thaliana


Gene families : OG0002670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.58
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cba_g15751 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Cre17.g728150 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
GSVIVT01003730001 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64650.2 YKT61, ATGP1,... YKT6-type R-type SNARE longin protein 0.01 OrthoFinder output from all 47 species
Mp5g07670.1 YKT61, ATGP1, ATYKT61 YKT6-type R-type SNARE longin protein 0.01 OrthoFinder output from all 47 species
Nbi_g44160 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ppi_g21511 ATYKT62, YKT62 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ppi_g27054 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Smo166326 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Spa_g35912 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Zm00001e028669_P001 YKT61, ATGP1,... YKT6-type R-type SNARE longin protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 55 108
No external refs found!