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  5. Cpa|evm.model.tig00020554.131

Cpa|evm.model.tig00020554.131


No description available


Gene families : OG0005210 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00157140 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G18900 No alias Transducin/WD40 repeat-like superfamily protein 0.08 OrthoFinder output from all 47 species
Adi_g085575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0026.g023316 No alias not classified & original description: CDS=130-2748 0.05 OrthoFinder output from all 47 species
Ceric.03G099700.1 Ceric.03G099700 not classified & original description: pacid=50571866... 0.06 OrthoFinder output from all 47 species
Cre04.g215350 No alias No description available 0.08 OrthoFinder output from all 47 species
Dac_g22350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030738001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os12g41620.1 LOC_Os12g41620 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g04918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428181g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_40164g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9860436g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g09630.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g14500 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo166499 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc07g066410.4.1 Solyc07g066410 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g25780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003211_P001 Zm00001e003211 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 244 278
IPR001680 WD40_repeat 451 477
No external refs found!