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  5. Cpa|evm.model.tig00020537.44

Cpa|evm.model.tig00020537.44


Description : Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor


Gene families : OG0003748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003748_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020537.44

Target Alias Description ECC score Gene Family Method Actions
Azfi_s1176.g098874 No alias recruitment factor of SWR1 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Ore_g09349 No alias recruitment factor of SWR1 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Solyc01g079210.3.1 Solyc01g079210 SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042157 lipoprotein metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032563 DAMP1_SANT-like 628 705
No external refs found!