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  5. Cpa|evm.model.tig00020516.11

Cpa|evm.model.tig00020516.11


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020516.11

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000262.5 No alias Histone H3.3a OS=Lilium longiflorum 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000381.14 No alias Histone H3.3a OS=Lilium longiflorum 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000743.9 No alias Histone H3.3a OS=Lilium longiflorum 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001007.15 No alias Histone H3.3a OS=Lilium longiflorum 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020598.3 No alias Histone H3.3a OS=Lilium longiflorum 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020693.4 No alias Histone H3.3a OS=Lilium longiflorum 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020876.4 No alias Histone H3.3a OS=Lilium longiflorum 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 10 136
No external refs found!