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  5. Cpa|evm.model.tig00001628.5

Cpa|evm.model.tig00001628.5 (PCFS4)


Aliases : PCFS4

Description : RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component


Gene families : OG0001185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001628.5

Target Alias Description ECC score Gene Family Method Actions
Aop_g13602 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.01 OrthoFinder output from all 47 species
GSVIVT01012646001 PCFS4 RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.01 OrthoFinder output from all 47 species
Lfl_g11409 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Nbi_g08557 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.01 OrthoFinder output from all 47 species
Ore_g44715 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.01 OrthoFinder output from all 47 species
Sam_g45181 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g48755 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.01 OrthoFinder output from all 47 species
Zm00001e009485_P001 Zm00001e009485 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA

No InterPro domains available for this sequence

No external refs found!