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  5. Cpa|evm.model.tig00001542.22

Cpa|evm.model.tig00001542.22


Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component


Gene families : OG0003199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001542.22
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00158470 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.01 OrthoFinder output from all 47 species
AT5G23540 No alias Mov34/MPN/PAD-1 family protein 0.07 OrthoFinder output from all 47 species
Adi_g086661 No alias regulatory component *(RPN11) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Aev_g41509 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ala_g01408 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Als_g12198 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g01609 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63211.t1 Aspi01Gene63211 regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Azfi_s0113.g045904 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Azfi_s0230.g059167 No alias regulatory component *(RPN11) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Cba_g15517 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.06G045400.1 Ceric.06G045400 regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.10G008700.1 Ceric.10G008700 regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cre01.g011500 No alias Protein degradation.26S proteasome.regulatory... 0.17 OrthoFinder output from all 47 species
Dac_g03686 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Dcu_g00902 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ehy_g11947 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
GSVIVT01009529001 No alias Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Gb_24814 No alias regulatory component RPN11 of 26S proteasome 0.01 OrthoFinder output from all 47 species
LOC_Os01g16190.1 LOC_Os01g16190 regulatory component RPN11 of 26S proteasome 0.12 OrthoFinder output from all 47 species
LOC_Os05g30800.1 LOC_Os05g30800 regulatory component RPN11 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Len_g05256 No alias regulatory component *(RPN11) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Len_g16240 No alias regulatory component *(RPN11) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Lfl_g00788 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
MA_10428869g0010 No alias regulatory component RPN11 of 26S proteasome 0.06 OrthoFinder output from all 47 species
MA_10429431g0020 No alias regulatory component RPN11 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp5g01180.1 No alias regulatory component RPN11 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Nbi_g18621 No alias regulatory component *(RPN11) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Ore_g19807 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pnu_g00505 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g07997 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo271544 No alias Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Smo403773 No alias Protein degradation.26S proteasome.regulatory... 0.01 OrthoFinder output from all 47 species
Solyc04g079200.3.1 Solyc04g079200 regulatory component RPN11 of 26S proteasome 0.09 OrthoFinder output from all 47 species
Spa_g21858 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Spa_g41482 No alias regulatory component *(RPN11) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Tin_g01686 No alias regulatory component *(RPN11) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Zm00001e017298_P002 Zm00001e017298 regulatory component RPN11 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 2 109
IPR024969 Rpn11/EIF3F_C 144 266
No external refs found!