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  5. Cpa|evm.model.tig00001339.16

Cpa|evm.model.tig00001339.16


Description : Histidine--tRNA ligase, cytoplasmic OS=Oryza sativa subsp. japonica


Gene families : OG0004151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001339.16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00100010 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder output from all 47 species
Aob_g08445 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G033300.1 Ceric.23G033300 EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species
MA_10427714g0010 No alias Histidine--tRNA ligase, cytoplasmic OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
MA_10435871g0020 No alias Histidine--tRNA ligase, cytoplasmic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ore_g17348 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species
Spa_g09889 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.01 OrthoFinder output from all 47 species
Zm00001e029731_P005 Zm00001e029731 histidine-tRNA ligase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004154 Anticodon-bd 216 278
No external refs found!