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  5. Cpa|evm.model.tig00001307.5

Cpa|evm.model.tig00001307.5


No description available


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001307.5

Target Alias Description ECC score Gene Family Method Actions
AT1G49400 emb1129 Nucleic acid-binding, OB-fold-like protein 0.02 OrthoFinder output from all 47 species
Als_g05225 emb1129 component *(uS17m) of small mitoribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Ceric.03G062600.1 emb1129, Ceric.03G062600 component *(uS17m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os08g27090.1 emb1129, LOC_Os08g27090 component mtRPS17 of small ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
MA_598246g0010 emb1129 component mtRPS17 of small ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Solyc12g009380.2.1 emb1129, Solyc12g009380 component mtRPS17 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g00782 emb1129 component *(uS17m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Spa_g21991 emb1129 component *(uS17m) of small mitoribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Zm00001e022163_P001 emb1129, Zm00001e022163 component mtRPS17 of small ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 11 77
No external refs found!