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  5. Cpa|evm.model.tig00001307.14

Cpa|evm.model.tig00001307.14 (HDA09, HDA9)


Aliases : HDA09, HDA9

Description : Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 364.2) & Histone deacetylase 9 OS=Arabidopsis thaliana


Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001307.14
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT3G44490 hda17 histone deacetylase 17 0.02 OrthoFinder output from all 47 species
Adi_g105321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25767 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Aob_g06626 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.01 OrthoFinder output from all 47 species
Aop_g01789 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.01 OrthoFinder output from all 47 species
Aop_g18348 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.01 OrthoFinder output from all 47 species
Azfi_s0037.g025970 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Cre09.g387393 ATHDA19, HDA1,... Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
Dac_g14942 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Dcu_g01364 HDA09, HDA9 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.01 OrthoFinder output from all 47 species
Dcu_g12683 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
GSVIVT01023839001 ATHDA19, HDA1,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Msp_g14220 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.01 OrthoFinder output from all 47 species
Msp_g28791 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022091 HDA09, HDA9 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species
Tin_g00790 HDA09, HDA9 EC_3.5 hydrolase acTing on carbon-nitrogen bond, other... 0.01 OrthoFinder output from all 47 species
Tin_g07483 ATHDA19, HDA1,... EC_3.5 hydrolase acTing on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Zm00001e008229_P001 HDA09, HDA9,... class-I histone deacetylase. component HDA9 of HDA9-PWR... 0.03 OrthoFinder output from all 47 species
Zm00001e022237_P002 HDA6, RTS1,... class-I histone deacetylase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 22 203
No external refs found!