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  5. Cpa|evm.model.tig00001292.5

Cpa|evm.model.tig00001292.5 (CHR24)


Aliases : CHR24

Description : Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana


Gene families : OG0005354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001292.5
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026450001 CHR24 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Gb_17075 CHR24 chromatin remodeling factor (ERCC6) 0.03 OrthoFinder output from all 47 species
LOC_Os04g59624.2 CHR24, LOC_Os04g59624 chromatin remodeling factor (ERCC6) 0.03 OrthoFinder output from all 47 species
MA_18372g0010 CHR24 Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g29760.1 CHR24 chromatin remodeling factor (ERCC6) 0.04 OrthoFinder output from all 47 species
Solyc01g068280.3.1 CHR24, Solyc01g068280 chromatin remodeling factor (ERCC6) 0.03 OrthoFinder output from all 47 species
Spa_g24729 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g19329 CHR24 chromaTin remodeling factor *(ERCC6) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007521_P001 CHR24, Zm00001e007521 chromatin remodeling factor (ERCC6) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 20 135
No external refs found!