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  5. Cpa|evm.model.tig00001249.9

Cpa|evm.model.tig00001249.9 (ATF1, TRXF1)


Aliases : ATF1, TRXF1

Description : Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001249.9

Target Alias Description ECC score Gene Family Method Actions
Als_g00422 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g45667 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.37G049100.1 ATHM4, TRX-M4,... not classified & original description: pacid=50616292... 0.02 OrthoFinder output from all 47 species
GSVIVT01019070001 TRXF2, ATF2 Redox homeostasis.chloroplast redox homeostasis.F-type... 0.01 OrthoFinder output from all 47 species
Len_g21729 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g19425 ATF1, TRXF1 F-type thioredoxin *(Trx-F) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g00498 TRXF2, ATF2 F-type thioredoxin *(Trx-F) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027512_P002 TRXF2, ATF2,... F-type thioredoxin 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 50 150
No external refs found!