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  5. Cpa|evm.model.tig00001187.20

Cpa|evm.model.tig00001187.20 (RPT5A, ATS6A.2)


Aliases : RPT5A, ATS6A.2

Description : 26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica


Gene families : OG0003325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001187.20

Target Alias Description ECC score Gene Family Method Actions
AT1G09100 RPT5B 26S proteasome AAA-ATPase subunit RPT5B 0.02 OrthoFinder output from all 47 species
AT3G05530 RPT5A, ATS6A.2 regulatory particle triple-A ATPase 5A 0.04 OrthoFinder output from all 47 species
Als_g55052 RPT5A, ATS6A.2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07899 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene28244.t1 RPT5A, ATS6A.2,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g010505 RPT5B regulatory component *(RPT5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.14G077800.1 RPT5A, ATS6A.2,... regulatory component *(RPT5) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cre10.g439150 RPT5A, ATS6A.2 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
Dcu_g01308 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Dde_g12003 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Gb_01340 RPT5A, ATS6A.2 regulatory component RPT5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Gb_25630 RPT5A, ATS6A.2 26S proteasome regulatory subunit 6A homolog OS=Solanum... 0.02 OrthoFinder output from all 47 species
LOC_Os02g56000.1 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
LOC_Os06g07630.1 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Lfl_g26943 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
MA_44873g0010 RPT5A, ATS6A.2 26S proteasome regulatory subunit 6A homolog OS=Oryza... 0.01 OrthoFinder output from all 47 species
Mp3g09490.1 RPT5A, ATS6A.2 regulatory component RPT5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Msp_g05078 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pp3c5_21920V3.1 RPT5A, ATS6A.2,... regulatory particle triple-A ATPase 5A 0.04 OrthoFinder output from all 47 species
Smo74992 RPT5A, ATS6A.2 Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Solyc01g099760.3.1 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Spa_g12836 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Tin_g01827 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Zm00001e016153_P002 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e031055_P001 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 215 331
IPR032501 Prot_ATP_ID_OB_C 82 158
No external refs found!