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  5. Cpa|evm.model.tig00001164.8

Cpa|evm.model.tig00001164.8 (XRN2, AtXRN2)


Aliases : XRN2, AtXRN2

Description : 5-3 exoribonuclease 2 OS=Arabidopsis thaliana


Gene families : OG0000769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001164.8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00491p00000370 XRN3, AtXRN3,... 5-3 exoribonuclease 3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Adi_g078672 EIN5, AIN1, XRN4, ATXRN4 exoribonuclease *(XRN4) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g06747 XRN3, AtXRN3 exoribonuclease *(XRN4) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g11344 XRN3, AtXRN3 exoribonuclease *(RAT1/XRN2) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g42552 EIN5, AIN1, XRN4, ATXRN4 exoribonuclease *(XRN4) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004527 exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR004859 Xrn1_N 59 157
IPR004859 Xrn1_N 1 50
No external refs found!