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  5. Cpa|evm.model.tig00001155.3

Cpa|evm.model.tig00001155.3


Description : Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0001572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001155.3

Target Alias Description ECC score Gene Family Method Actions
Adi_g073063 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g06285 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g31538 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63556.t1 Aspi01Gene63556 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63557.t1 Aspi01Gene63557 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008838 No alias carotenoid isomerase *(DWARF27) & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0386.g067568 No alias not classified & original description: CDS=62-952 0.02 OrthoFinder output from all 47 species
Ceric.09G025400.1 Ceric.09G025400 not classified & original description: pacid=50588408... 0.03 OrthoFinder output from all 47 species
Dac_g13831 No alias carotenoid isomerase *(DWARF27) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g02210.2 LOC_Os08g02210 Beta-carotene isomerase D27, chloroplastic... 0.01 OrthoFinder output from all 47 species
Len_g47603 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g11491 No alias carotenoid isomerase *(DWARF27) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g13325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59939 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g09174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo173467 No alias Phytohormones.strigolactone.synthesis.DWARF27... 0.03 OrthoFinder output from all 47 species
Smo99956 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0022411cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR025114 D27-like_C 173 250
No external refs found!