Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component
Gene families : OG0003227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003227_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00111p00142440 | evm_27.TU.AmTr_v1... | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
AMTR_s00111p00143180 | evm_27.TU.AmTr_v1... | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
AMTR_s00111p00143660 | evm_27.TU.AmTr_v1... | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
AT3G63460 | No alias | transducin family protein / WD-40 repeat family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g011557 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
Adi_g057724 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g07314 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g22457 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g15456 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.02G027200.1 | Ceric.02G027200 | scaffold component *(Sec31) of coat protein complex &... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g522450 | No alias | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g03156 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g05955 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g21292 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01001441001 | No alias | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.03 | OrthoFinder output from all 47 species | |
Gb_38895 | No alias | scaffolding component Sec31 of coat protein complex | 0.02 | OrthoFinder output from all 47 species | |
Len_g13782 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04962 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.02 | OrthoFinder output from all 47 species | |
MA_57417g0010 | No alias | scaffolding component Sec31 of coat protein complex | 0.02 | OrthoFinder output from all 47 species | |
Mp7g09730.1 | No alias | scaffolding component Sec31 of coat protein complex | 0.04 | OrthoFinder output from all 47 species | |
Msp_g15835 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g04454 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g26748 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g34792 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g43593 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
Pnu_g21002 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g32771 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.01 | OrthoFinder output from all 47 species | |
Sam_g04414 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g25577 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g51160 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
Smo230767 | No alias | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g088020.3.1 | Solyc01g088020 | scaffolding component Sec31 of coat protein complex | 0.02 | OrthoFinder output from all 47 species | |
Spa_g11489 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010894_P003 | Zm00001e010894 | scaffolding component Sec31 of coat protein complex | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035747_P003 | Zm00001e035747 | scaffolding component Sec31 of coat protein complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
CC | GO:0005856 | cytoskeleton | IEP | HCCA |
CC | GO:0005885 | Arp2/3 protein complex | IEP | HCCA |
BP | GO:0007015 | actin filament organization | IEP | HCCA |
BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | HCCA |
CC | GO:0015629 | actin cytoskeleton | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
BP | GO:0016197 | endosomal transport | IEP | HCCA |
BP | GO:0016482 | cytosolic transport | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
BP | GO:0030832 | regulation of actin filament length | IEP | HCCA |
BP | GO:0030833 | regulation of actin filament polymerization | IEP | HCCA |
BP | GO:0032271 | regulation of protein polymerization | IEP | HCCA |
BP | GO:0032535 | regulation of cellular component size | IEP | HCCA |
BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | HCCA |
BP | GO:0032970 | regulation of actin filament-based process | IEP | HCCA |
BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | HCCA |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | HCCA |
BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | HCCA |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | HCCA |
BP | GO:0045010 | actin nucleation | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0065008 | regulation of biological quality | IEP | HCCA |
BP | GO:0090066 | regulation of anatomical structure size | IEP | HCCA |
BP | GO:0097435 | supramolecular fiber organization | IEP | HCCA |
BP | GO:0110053 | regulation of actin filament organization | IEP | HCCA |
BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |