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  5. Cpa|evm.model.tig00001128.6

Cpa|evm.model.tig00001128.6 (ATCCD1, CCD1, NCED1, ATNCED1)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1

No description available


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001128.6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00255760 CCD4, NCED4,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00253450 ATCCD1, CCD1,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.02 OrthoFinder output from all 47 species
Adi_g060963 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Adi_g060964 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ala_g04422 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54185.t1 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012346 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Cba_g27810 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dcu_g03912 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dde_g10912 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ehy_g11200 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
LOC_Os12g44310.1 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.05 OrthoFinder output from all 47 species
Len_g08813 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Lfl_g10843 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
MA_10435932g0010 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.02 OrthoFinder output from all 47 species
Msp_g24184 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Nbi_g12269 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ore_g10877 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ore_g27316 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Pir_g14052 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Pir_g58493 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Pnu_g06396 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ppi_g33429 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Ppi_g63649 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018302 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Sam_g16324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo165469 ATCCD1, CCD1,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Smo80651 NCED3, SIS7,... Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
Solyc01g087270.3.1 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.02 OrthoFinder output from all 47 species
Tin_g08721 ATCCD1, CCD1,... EC_1.13 oxidoreductase acTing on single donor with... 0.01 OrthoFinder output from all 47 species
Zm00001e038960_P002 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 297 353
IPR004294 Carotenoid_Oase 1 153
No external refs found!