Cpa|evm.model.tig00001107.20 (CH-CPN60A, CPN60A, SLP)

Aliases : CH-CPN60A, CPN60A, SLP

Description : RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001107.20
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
Aev_g09354	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g11289	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g03806	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g19819	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Len_g28966	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g06617	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g10336	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g10825	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g32241	No alias	chaperone *(Hsp60) & original description: none	0.01	OrthoFinder output from all 47 species
Solyc03g120850.4.1	CPN60B, LEN1,...	subunit beta of Cpn60 chaperonin complex. component...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0051260	protein homooligomerization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	18	476

External Links

No external refs found!