Cpa|evm.model.tig00001107.10

Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase alpha complex.POLA2 replication fork tethering component

Gene families : OG0007931 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007931_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001107.10
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00201540	POLA2,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.02	OrthoFinder output from all 47 species
AT1G67630	POLA2	DNA polymerase alpha 2	0.05	OrthoFinder output from all 47 species
Als_g48017	POLA2	replication fork tethering component *(POLA2) of DNA...	0.03	OrthoFinder output from all 47 species
Aop_g00724	POLA2	replication fork tethering component *(POLA2) of DNA...	0.06	OrthoFinder output from all 47 species
Aspi01Gene33933.t1	POLA2, Aspi01Gene33933	replication fork tethering component *(POLA2) of DNA...	0.05	OrthoFinder output from all 47 species
Ceric.33G056000.1	POLA2, Ceric.33G056000	replication fork tethering component *(POLA2) of DNA...	0.06	OrthoFinder output from all 47 species
Cre01.g017450	POLA2	Cell cycle.interphase.DNA replication.elongation.DNA...	0.06	OrthoFinder output from all 47 species
Dac_g09664	POLA2	replication fork tethering component *(POLA2) of DNA...	0.01	OrthoFinder output from all 47 species
GSVIVT01010354001	POLA2	Cell cycle.interphase.DNA replication.elongation.DNA...	0.1	OrthoFinder output from all 47 species
Gb_31734	POLA2	replication fork tethering component POLA2 of DNA...	0.11	OrthoFinder output from all 47 species
LOC_Os12g13950.1	POLA2, LOC_Os12g13950	replication fork tethering component POLA2 of DNA...	0.08	OrthoFinder output from all 47 species
Len_g14276	POLA2	replication fork tethering component *(POLA2) of DNA...	0.02	OrthoFinder output from all 47 species
MA_14020g0010	POLA2	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_14020g0030	POLA2	replication fork tethering component POLA2 of DNA...	0.09	OrthoFinder output from all 47 species
Mp6g03190.1	POLA2	replication fork tethering component POLA2 of DNA...	0.12	OrthoFinder output from all 47 species
Msp_g09651	POLA2	replication fork tethering component *(POLA2) of DNA...	0.01	OrthoFinder output from all 47 species
Nbi_g11355	POLA2	replication fork tethering component *(POLA2) of DNA...	0.02	OrthoFinder output from all 47 species
Ppi_g13980	POLA2	replication fork tethering component *(POLA2) of DNA...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001086	POLA2	replication fork tethering component *(POLA2) of DNA...	0.06	OrthoFinder output from all 47 species
Solyc05g014540.3.1	POLA2, Solyc05g014540	replication fork tethering component POLA2 of DNA...	0.1	OrthoFinder output from all 47 species
Spa_g39148	POLA2	replication fork tethering component *(POLA2) of DNA...	0.05	OrthoFinder output from all 47 species
Tin_g04110	POLA2	replication fork tethering component *(POLA2) of DNA...	0.02	OrthoFinder output from all 47 species
Zm00001e039659_P001	POLA2, Zm00001e039659	replication fork tethering component POLA2 of DNA...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003887	DNA-directed DNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034061	DNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003896	DNA primase activity	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007185	DNA_pol_a/d/e_bsu	206	355

External Links

No external refs found!

Cpa|evm.model.tig00001107.10

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation