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  5. Cpa|evm.model.tig00001098.5

Cpa|evm.model.tig00001098.5 (PBA1)


Aliases : PBA1

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component


Gene families : OG0003808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001098.5
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00199560 PBA1,... Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
AT4G31300 PBA1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.1 OrthoFinder output from all 47 species
Adi_g063247 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Aev_g02000 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Ala_g10663 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Als_g51694 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aob_g25523 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g00255 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Azfi_s0680.g082009 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.24G046300.1 PBA1, Ceric.24G046300 beta-type-1 component *(PBA) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Cre06.g279000 PBA1 Protein degradation.26S proteasome.20S core... 0.16 OrthoFinder output from all 47 species
Cre12.g531100 PBA1 Protein degradation.26S proteasome.20S core... 0.15 OrthoFinder output from all 47 species
Dac_g01306 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032253001 PBA1 Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
GSVIVT01035567001 PBA1 Protein degradation.26S proteasome.20S core... 0.01 OrthoFinder output from all 47 species
LOC_Os02g53060.1 PBA1, LOC_Os02g53060 component beta type-1 of 26S proteasome 0.09 OrthoFinder output from all 47 species
LOC_Os06g04800.1 PBA1, LOC_Os06g04800 component beta type-1 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Len_g14846 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Len_g14847 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Mp6g09980.1 PBA1 component beta type-1 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Msp_g08337 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Nbi_g00361 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Ore_g05180 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pir_g00835 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pir_g54950 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ppi_g41753 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004858 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Sam_g07445 No alias beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Smo227897 PBA1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Solyc07g016200.3.1 PBA1, Solyc07g016200 component beta type-1 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Spa_g09819 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Spa_g09820 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.09 OrthoFinder output from all 47 species
Spa_g09821 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Spa_g18519 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Tin_g26432 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Zm00001e029965_P002 PBA1, Zm00001e029965 component beta type-1 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e036550_P001 PBA1, Zm00001e036550 component beta type-1 of 26S proteasome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 64 244
No external refs found!