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Description : RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT4 component
Gene families : OG0003273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003273_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00023p00245540 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.deadenylation-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G45630 | No alias | RNA binding (RRM/RBD/RNP motifs) family protein | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g09045 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13675 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene25993.t1 | Aspi01Gene25993 | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene33440.t2 | Aspi01Gene33440 | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0253.g060398 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07158 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g34846 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.01 | OrthoFinder output from all 47 species | |
| MA_26070g0010 | No alias | component NOT4 of mRNA deadenylation CCR4-NOT complex | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g03113 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g37248 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g33176 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0164.g024076 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009510.4.1 | Solyc04g009510 | component NOT4 of mRNA deadenylation CCR4-NOT complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020808_P001 | Zm00001e020808 | component NOT4 of mRNA deadenylation CCR4-NOT complex | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |