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Aliases : PUM5, APUM5
No description available
Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00251030 | APUM2, PUM2,... | Pumilio homolog 2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g057512 | APUM2, PUM2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g06713 | PUM1, APUM1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene07515.t1 | APUM4, PUM4,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0205.g057726 | APUM2, PUM2 | not classified & original description: CDS=300-3455 | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g746647 | APUM6, PUM6 | Pumilio homolog 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25330 | PUM1, APUM1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g74030.1 | PUM1, APUM1,... | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g01910.1 | PUM1, APUM1,... | Pumilio homolog 2 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g06170 | PUM1, APUM1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08859 | PUM1, APUM1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g11828 | PUM1, APUM1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g09055 | APUM4, PUM4 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g11332 | PUM1, APUM1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c16_13520V3.1 | Pp3c16_13520 | pumilio 2 | 0.02 | OrthoFinder output from all 47 species | |
| Smo78497 | APUM2, PUM2 | Pumilio homolog 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g076340.3.1 | APUM2, PUM2,... | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021916_P002 | APUM6, PUM6,... | Pumilio homolog 5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027653_P001 | PUM1, APUM1,... | Pumilio homolog 2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029661_P001 | APUM2, PUM2,... | Pumilio homolog 2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |