Mp1g23970.1


Description : protein factor PRPF4 of U4/U6 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG_01_0005235 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005235_tree ,
OG_02_0005836 (LandPlants) Phylogenetic Tree(s): OG_02_0005836_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g23970.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cre16.g662800 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 Archaeplastida
Cre16.g662852 No alias No description available 0.04 Archaeplastida
GSVIVT01033551001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 Archaeplastida
Gb_29006 No alias U4/U6 small nuclear ribonucleoprotein PRP4-like protein... 0.02 Archaeplastida
LOC_Os03g23935.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.03 Archaeplastida
MA_10434586g0010 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.02 Archaeplastida
GSVIVT01033551001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 LandPlants
LOC_Os03g23935.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014906 PRP4-like 149 176
IPR001680 WD40_repeat 421 452
IPR001680 WD40_repeat 499 537
IPR001680 WD40_repeat 374 410
IPR001680 WD40_repeat 327 369
IPR001680 WD40_repeat 542 579
IPR001680 WD40_repeat 460 494
No external refs found!