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  5. Cpa|evm.model.tig00000880.12

Cpa|evm.model.tig00000880.12


Description : Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana


Gene families : OG0004650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000880.12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00176430 evm_27.TU.AmTr_v1... Probable rRNA-processing protein EBP2 homolog... 0.01 OrthoFinder output from all 47 species
AT3G22660 No alias rRNA processing protein-related 0.03 OrthoFinder output from all 47 species
Adi_g036474 No alias pre-60S ribosomal subunit assembly factor *(EBP2) &... 0.01 OrthoFinder output from all 47 species
Aop_g09403 No alias pre-60S ribosomal subunit assembly factor *(EBP2) &... 0.01 OrthoFinder output from all 47 species
Ceric.28G019100.1 Ceric.28G019100 pre-60S ribosomal subunit assembly factor *(EBP2) &... 0.02 OrthoFinder output from all 47 species
Cre07.g351750 No alias Probable rRNA-processing protein EBP2 homolog... 0.05 OrthoFinder output from all 47 species
GSVIVT01018514001 No alias Probable rRNA-processing protein EBP2 homolog... 0.09 OrthoFinder output from all 47 species
LOC_Os07g29320.1 LOC_Os07g29320 pre-60S ribosomal subunit assembly factor (EBP2) 0.03 OrthoFinder output from all 47 species
MA_138177g0010 No alias pre-60S ribosomal subunit assembly factor (EBP2) 0.05 OrthoFinder output from all 47 species
Mp3g18310.1 No alias pre-60S ribosomal subunit assembly factor (EBP2) 0.16 OrthoFinder output from all 47 species
Pp3c6_25210V3.1 Pp3c6_25210 rRNA processing protein-related 0.01 OrthoFinder output from all 47 species
Smo175633 No alias Probable rRNA-processing protein EBP2 homolog... 0.02 OrthoFinder output from all 47 species
Solyc01g006090.3.1 Solyc01g006090 pre-60S ribosomal subunit assembly factor (EBP2) 0.12 OrthoFinder output from all 47 species
Solyc01g006170.4.1 Solyc01g006170 pre-60S ribosomal subunit assembly factor (EBP2) 0.08 OrthoFinder output from all 47 species
Zm00001e010357_P001 Zm00001e010357 pre-60S ribosomal subunit assembly factor (EBP2) 0.1 OrthoFinder output from all 47 species
Zm00001e013941_P001 Zm00001e013941 pre-60S ribosomal subunit assembly factor (EBP2) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008610 Ebp2 55 342
No external refs found!