Cpa|evm.model.tig00000857.17 (ATATM3, STA1, ATM3)

Aliases : ATATM3, STA1, ATM3

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0002075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000857.17

Target	Alias	Description	ECC score	Gene Family Method
AT4G28630	ATATM1, ATM1	ABC transporter of the mitochondrion 1	0.01	OrthoFinder output from all 47 species
Aev_g11140	ATATM1, ATM1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g13641	ATATM1, ATM1	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.26G039000.1	ATATM1, ATM1,...	transport protein ATM of mitochondrial ISC system export...	0.02	OrthoFinder output from all 47 species
Len_g30770	ATATM1, ATM1	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Mp1g19940.1	ATATM1, ATM1	transport protein ATM of mitochondrial ISC system export...	0.01	OrthoFinder output from all 47 species
Mp3g20140.1	ATATM3, STA1, ATM3	transport protein ATM of mitochondrial ISC system export...	0.02	OrthoFinder output from all 47 species
Spa_g07593	ATATM3, STA1, ATM3	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	435	583
IPR011527	ABC1_TM_dom	107	372

External Links

No external refs found!