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  5. Cpa|evm.model.tig00000842.25

Cpa|evm.model.tig00000842.25


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT4 delta subunit


Gene families : OG0005270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000842.25
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT3G18190 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
Als_g49234 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.01 OrthoFinder output from all 47 species
Aop_g04361 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043269 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Cba_g04618 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Cre05.g234639 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
LOC_Os02g22780.1 LOC_Os02g22780 CCT4 subunit delta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
MA_18588g0010 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Mp6g14150.1 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Ore_g16303 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.01 OrthoFinder output from all 47 species
Pp3c22_2530V3.1 Pp3c22_2530 TCP-1/cpn60 chaperonin family protein 0.01 OrthoFinder output from all 47 species
Sam_g12483 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Solyc03g118910.1.1 Solyc03g118910 CCT4 subunit delta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Zm00001e000128_P002 Zm00001e000128 CCT4 subunit delta of CCT chaperonin folding complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 37 539
No external refs found!