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  5. Cpa|evm.model.tig00000829.3

Cpa|evm.model.tig00000829.3 (CEF)


Aliases : CEF

Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component


Gene families : OG0003525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000829.3
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00084390 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
AT3G44340 CEF clone eighty-four 0.03 OrthoFinder output from all 47 species
AT4G32640 No alias Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
Adi_g099755 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.01 OrthoFinder output from all 47 species
Aev_g01583 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.01 OrthoFinder output from all 47 species
Ala_g05132 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.01 OrthoFinder output from all 47 species
Als_g15380 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Aob_g10600 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Aop_g04939 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00682.t1 CEF, Aspi01Gene00682 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Cba_g31762 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Ceric.16G039000.1 Ceric.16G039000 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Cre01.g035850 CEF Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g06456 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Dcu_g06486 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
GSVIVT01014611001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_38621 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
LOC_Os11g29200.1 CEF, LOC_Os11g29200 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
LOC_Os12g24250.1 CEF, LOC_Os12g24250 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Len_g03398 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Lfl_g26302 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
MA_45050g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
MA_635762g0010 No alias Protein transport protein Sec24-like At4g32640... 0.02 OrthoFinder output from all 47 species
Mp7g13350.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Nbi_g12383 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Pir_g11399 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011262 CEF component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.01 OrthoFinder output from all 47 species
Smo140536 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
Spa_g52344 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Tin_g10861 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Zm00001e021459_P002 CEF, Zm00001e021459 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 49 283
IPR012990 Sec23_24_beta_S 288 372
IPR006900 Sec23/24_helical_dom 383 481
IPR007123 Gelsolin-like_dom 510 563
No external refs found!