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No description available
Gene families : OG0002016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002016_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000829.13 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00018p00254940 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00031p00165100 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g17660 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene26106.t1 | Aspi01Gene26106 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001382 | No alias | not classified & original description: CDS=65-1795 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0050.g031136 | No alias | not classified & original description: CDS=145-1557 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0390.g067701 | No alias | not classified & original description: CDS=204-1688 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G037000.1 | Ceric.38G037000 | not classified & original description: pacid=50579751... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12056 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os10g06130.1 | LOC_Os10g06130 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g08648 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g28859 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g57087 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g16813 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g009220.3.1 | Solyc10g009220 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039207_P005 | Zm00001e039207 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005319 | lipid transporter activity | IEP | HCCA |
| MF | GO:0005548 | phospholipid transporter activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006869 | lipid transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| BP | GO:0015748 | organophosphate ester transport | IEP | HCCA |
| BP | GO:0015914 | phospholipid transport | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 31 | 99 |
| No external refs found! |