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Description : RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component
Gene families : OG0002046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002046_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00106p00133350 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.deadenylation-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G02080 | No alias | transcription regulators | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g055874 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12815 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g17486 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g22134 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g06241 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28294.t1 | Aspi01Gene28294 | scaffold component *(NOT1) of mRNA deadenylation... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene28294.t2 | Aspi01Gene28294 | scaffold component *(NOT1) of mRNA deadenylation... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035985 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G056500.1 | Ceric.34G056500 | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000874001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018178001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018721001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_12251 | No alias | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g40780.1 | LOC_Os10g40780 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12091 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10188 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.01 | OrthoFinder output from all 47 species | |
| MA_1121588g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_42843g0010 | No alias | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.05 | OrthoFinder output from all 47 species | |
| Mp3g11860.1 | No alias | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16116 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22265 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40588 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Smo440060 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g090780.3.1 | Solyc01g090780 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e039114_P001 | Zm00001e039114 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030126 | COPI vesicle coat | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |