Cpa|evm.model.tig00000741.4 (ATPGP4, PGP4, ABCB4, MDR4)

Aliases : ATPGP4, PGP4, ABCB4, MDR4

Description : ABC transporter B family member 21 OS=Arabidopsis thaliana

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000741.4

Target	Alias	Description	ECC score	Gene Family Method
Adi_g010452	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g23401	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g25900	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g17218	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g23811	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Gb_36862	PGP21	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g09720.1	LOC_Os02g09720	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
LOC_Os04g38570.1	ABCB19,...	auxin efflux transporter (ABCB19)	0.01	OrthoFinder output from all 47 species
Len_g02924	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g03498	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
MA_18863g0020	PGP3, MDR3	ABC transporter B family member 3 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Ore_g37526	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42482	PGP13	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g42899	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g49419	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g01345	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g13619	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g54716	PGP3, MDR3	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g38892	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g19381	PGP11	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g35292	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008716	D-alanine-D-alanine ligase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	699	905
IPR011527	ABC1_TM_dom	20	297
IPR003439	ABC_transporter-like_ATP-bd	1000	1149
IPR003439	ABC_transporter-like_ATP-bd	365	414

External Links

No external refs found!

Cpa|evm.model.tig00000741.4 (ATPGP4, PGP4, ABCB4, MDR4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation