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  5. Cpa|evm.model.tig00000737.3

Cpa|evm.model.tig00000737.3 (ATUBC1, UBC1)


Aliases : ATUBC1, UBC1

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein


Gene families : OG0001764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000737.3

Target Alias Description ECC score Gene Family Method Actions
Adi_g019867 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Adi_g067091 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 47 species
Ala_g04277 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g06892 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 47 species
Dcu_g17230 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g21454 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008045001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01022467001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os03g57790.1 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Lfl_g22542 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
MA_16089g0010 ATUBC2, UBC2 ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Nbi_g09243 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 47 species
Ore_g13697 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 47 species
Pp3c12_9550V3.1 ATUBC1, UBC1, Pp3c12_9550 ubiquiting-conjugating enzyme 2 0.02 OrthoFinder output from all 47 species
Solyc02g067420.3.1 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Solyc06g070980.3.1 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.04 OrthoFinder output from all 47 species
Spa_g14709 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 47 species
Spa_g14710 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g39905 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005950_P002 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Zm00001e011475_P001 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Zm00001e029917_P003 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species
Zm00001e032886_P001 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!